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LOC126816197 dual specificity protein phosphatase 1-B [ Patella vulgata (common limpet) ]

Gene ID: 126816197, updated on 16-Nov-2023

Summary

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Gene symbol
LOC126816197
Gene description
dual specificity protein phosphatase 1-B
See related
EnsemblRapid:ENSPVUG00005002107
Gene type
protein coding
RefSeq status
MODEL
Organism
Patella vulgata
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Gastropoda; Patellogastropoda; Patelloidea; Patellidae; Patella
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Genomic context

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See LOC126816197 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_05 current xgPatVulg1.2 (GCF_932274485.2) 3 NC_065881.2 (15347277..15363701, complement)
100 previous assembly xgPatVulg1.1 (GCF_932274485.1) 3 NC_065881.1 (75799114..75815540)

Chromosome 3 - NC_065881.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC126816138 Neighboring gene putative ferric-chelate reductase 1 Neighboring gene endoplasmic reticulum-Golgi intermediate compartment protein 1 Neighboring gene putative ferric-chelate reductase 1 Neighboring gene G-protein coupled receptor GRL101

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables MAP kinase tyrosine/serine/threonine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein tyrosine/threonine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of MAPK cascade IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dual specificity protein phosphatase 1-B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_932274485.2-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference xgPatVulg1.2

Genomic

  1. NC_065881.2 Reference xgPatVulg1.2

    Range
    15347277..15363701 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_050542465.2 → XP_050398422.1  dual specificity protein phosphatase 1-B

    Related
    ENSPVUP00005002248.1
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases