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LOC126771421 carotenoid isomerooxygenase-like [ Nymphalis io (European peacock) ]

Gene ID: 126771421, updated on 23-Nov-2023

Summary

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Gene symbol
LOC126771421
Gene description
carotenoid isomerooxygenase-like
See related
EnsemblRapid:ENSIIOG00005009521
Gene type
protein coding
RefSeq status
MODEL
Organism
Nymphalis io
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Papilionoidea; Nymphalidae; Nymphalinae; Nymphalis; Aglais
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Genomic context

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See LOC126771421 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
13
Annotation release Status Assembly Chr Location
100 current ilAglIoxx1.1 (GCF_905147045.1) 10 NC_065897.1 (105758..112668, complement)

Chromosome 10 - NC_065897.1Genomic Context describing neighboring genes Neighboring gene carotenoid isomerooxygenase-like Neighboring gene putative odorant receptor 65b Neighboring gene carotenoid isomerooxygenase-like Neighboring gene malate dehydrogenase-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_065897.1 Chromosome 10 Reference ilAglIoxx1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-carotene 15,15'-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables carotenoid dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carotene catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retinal metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carotenoid isomerooxygenase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nymphalis io Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ilAglIoxx1.1

Genomic

  1. NC_065897.1 Reference ilAglIoxx1.1

    Range
    105758..112668 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_050491290.1 → XP_050347247.1  carotenoid isomerooxygenase-like

    Related
    ENSIIOP00005015742.1, ENSIIOT00005018083.1
Nucleotide Protein
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