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SWIP strumpellin and WASH-interacting protein [ Anthonomus grandis grandis ]

Gene ID: 126748971, updated on 23-May-2024

Summary

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Gene symbol
SWIP
Gene description
strumpellin and WASH-interacting protein
See related
EnsemblRapid:ENSAGSG00005003457
Gene type
protein coding
RefSeq status
MODEL
Organism
Anthonomus grandis grandis (sub-species: grandis)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Curculionidae; Curculioninae; Anthonomini; Anthonomus
Orthologs
fruit fly all
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Genomic context

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See SWIP in Genome Data Viewer
Location:
chromosome: 22
Exon count:
16
Annotation release Status Assembly Chr Location
100 current icAntGran1.3 (GCF_022605725.1) 22 NC_065567.1 (3516341..3638034, complement)

Chromosome 22 - NC_065567.1Genomic Context describing neighboring genes Neighboring gene SRSF protein kinase 3-like Neighboring gene toll-like receptor 2 Neighboring gene uncharacterized LOC126748661 Neighboring gene uncharacterized LOC126748972 Neighboring gene uncharacterized LOC126748665 Neighboring gene NAP domain-containing protein SET

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_065567.1 Chromosome 22 Reference icAntGran1.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in endosomal transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endosome organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of WASH complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
WASH complex subunit 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Anthonomus grandis grandis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference icAntGran1.3

Genomic

  1. NC_065567.1 Reference icAntGran1.3

    Range
    3516341..3638034 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_050458535.1 → XP_050314492.1  WASH complex subunit 4 isoform X3

  2. XM_050458533.1 → XP_050314490.1  WASH complex subunit 4 isoform X1

    Related
    ENSAGSP00005004973.1, ENSAGST00005005578.1

  3. XM_050458534.1 → XP_050314491.1  WASH complex subunit 4 isoform X2

  4. XM_050458536.1 → XP_050314493.1  WASH complex subunit 4 isoform X4

Nucleotide Protein
Heading Accession and Version

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