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LOC126631237 auxilin-like protein 1 [ Malus sylvestris (European crab apple) ]

Gene ID: 126631237, updated on 23-Nov-2023

Summary

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Gene symbol
LOC126631237
Gene description
auxilin-like protein 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Malus sylvestris
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Malus
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Genomic context

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See LOC126631237 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
9
Annotation release Status Assembly Chr Location
100 current drMalSylv7.2 (GCF_916048215.2) 8 NC_062267.1 (2052482..2059694, complement)

Chromosome 8 - NC_062267.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC126631242 Neighboring gene bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase-like Neighboring gene proteasome subunit alpha type-1-A-like Neighboring gene uncharacterized LOC126632093 Neighboring gene uncharacterized LOC126632096

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_062267.1 Chromosome 8 Reference drMalSylv7.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables clathrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in clathrin coat disassembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in clathrin-dependent endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
auxilin-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Malus sylvestris Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference drMalSylv7.2 Primary Assembly

Genomic

  1. NC_062267.1 Reference drMalSylv7.2 Primary Assembly

    Range
    2052482..2059694 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_050301412.1 → XP_050157369.1  auxilin-like protein 1 isoform X6

  2. XM_050301409.1 → XP_050157366.1  auxilin-like protein 1 isoform X3

  3. XM_050301410.1 → XP_050157367.1  auxilin-like protein 1 isoform X4

  4. XM_050301411.1 → XP_050157368.1  auxilin-like protein 1 isoform X5

  5. XM_050301408.1 → XP_050157365.1  auxilin-like protein 1 isoform X2

  6. XM_050301407.1 → XP_050157364.1  auxilin-like protein 1 isoform X1

Nucleotide Protein
Heading Accession and Version

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