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LOC126619650 sulfoquinovosyl transferase SQD2-like [ Malus sylvestris (European crab apple) ]

Gene ID: 126619650, updated on 23-Nov-2023

Summary

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Gene symbol
LOC126619650
Gene description
sulfoquinovosyl transferase SQD2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Malus sylvestris
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Malus
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Genomic context

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See LOC126619650 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
11
Annotation release Status Assembly Chr Location
100 current drMalSylv7.2 (GCF_916048215.2) 4 NC_062263.1 (22404228..22408924, complement)

Chromosome 4 - NC_062263.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC126620078 Neighboring gene BAHD acyltransferase DCR-like Neighboring gene glycerol-3-phosphate dehydrogenase [NAD(+)] 1, chloroplastic-like Neighboring gene uncharacterized LOC126618208

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_062263.1 Chromosome 4 Reference drMalSylv7.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-sulfoquinovose:DAG sulfoquinovosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sulfolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sulfoquinovosyl transferase SQD2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Malus sylvestris Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference drMalSylv7.2 Primary Assembly

Genomic

  1. NC_062263.1 Reference drMalSylv7.2 Primary Assembly

    Range
    22404228..22408924 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_050288063.1 → XP_050144020.1  sulfoquinovosyl transferase SQD2-like isoform X1

  2. XM_050288064.1 → XP_050144021.1  sulfoquinovosyl transferase SQD2-like isoform X2

Nucleotide Protein
Heading Accession and Version

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