U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC126610975 phosphomevalonate kinase, peroxisomal-like [ Malus sylvestris (European crab apple) ]

Gene ID: 126610975, updated on 23-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC126610975
Gene description
phosphomevalonate kinase, peroxisomal-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Malus sylvestris
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Malus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC126610975 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
11
Annotation release Status Assembly Chr Location
100 current drMalSylv7.2 (GCF_916048215.2) 17 NC_062276.1 (29053539..29058536, complement)

Chromosome 17 - NC_062276.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC126610974 Neighboring gene CASP-like protein 1C1 Neighboring gene riboflavin synthase-like Neighboring gene uncharacterized LOC126611481

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_062276.1 Chromosome 17 Reference drMalSylv7.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphomevalonate kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in farnesyl diphosphate biosynthetic process, mevalonate pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in isopentenyl diphosphate biosynthetic process, mevalonate pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
phosphomevalonate kinase, peroxisomal-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Malus sylvestris Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference drMalSylv7.2 Primary Assembly

Genomic

  1. NC_062276.1 Reference drMalSylv7.2 Primary Assembly

    Range
    29053539..29058536 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_050279158.1 → XP_050135115.1  phosphomevalonate kinase, peroxisomal-like

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases