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LOC126593717 probable UDP-arabinopyranose mutase 5 [ Malus sylvestris (European crab apple) ]

Gene ID: 126593717, updated on 23-Nov-2023

Summary

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Gene symbol
LOC126593717
Gene description
probable UDP-arabinopyranose mutase 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Malus sylvestris
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Malus
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Genomic context

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See LOC126593717 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
4
Annotation release Status Assembly Chr Location
100 current drMalSylv7.2 (GCF_916048215.2) 12 NC_062271.1 (31996413..31999411, complement)

Chromosome 12 - NC_062271.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC126592381 Neighboring gene uncharacterized protein At4g13230-like Neighboring gene uncharacterized LOC126592445 Neighboring gene eukaryotic translation initiation factor 3 subunit B-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_062271.1 Chromosome 12 Reference drMalSylv7.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-arabinopyranose mutase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in UDP-L-arabinose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plant-type cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable UDP-arabinopyranose mutase 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Malus sylvestris Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference drMalSylv7.2 Primary Assembly

Genomic

  1. NC_062271.1 Reference drMalSylv7.2 Primary Assembly

    Range
    31996413..31999411 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_050259826.1 → XP_050115783.1  probable UDP-arabinopyranose mutase 5

  2. XM_050259824.1 → XP_050115781.1  probable UDP-arabinopyranose mutase 5

  3. XM_050259825.1 → XP_050115782.1  probable UDP-arabinopyranose mutase 5

Nucleotide Protein
Heading Accession and Version

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