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LOC126593342 mevalonate kinase [ Malus sylvestris (European crab apple) ]

Gene ID: 126593342, updated on 23-Nov-2023

Summary

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Gene symbol
LOC126593342
Gene description
mevalonate kinase
Gene type
protein coding
RefSeq status
MODEL
Organism
Malus sylvestris
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Malus
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Genomic context

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See LOC126593342 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
5
Annotation release Status Assembly Chr Location
100 current drMalSylv7.2 (GCF_916048215.2) 12 NC_062271.1 (29034640..29038691, complement)

Chromosome 12 - NC_062271.1Genomic Context describing neighboring genes Neighboring gene uncharacterized GPI-anchored protein At5g19250-like Neighboring gene NADPH-dependent aldehyde reductase 1, chloroplastic-like Neighboring gene amidase 1-like Neighboring gene amidase 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_062271.1 Chromosome 12 Reference drMalSylv7.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mevalonate kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in isoprenoid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mevalonate kinase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Malus sylvestris Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference drMalSylv7.2 Primary Assembly

Genomic

  1. NC_062271.1 Reference drMalSylv7.2 Primary Assembly

    Range
    29034640..29038691 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_050259384.1 → XP_050115341.1  mevalonate kinase

Nucleotide Protein
Heading Accession and Version

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