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LOC126585612 solanesyl diphosphate synthase 3, chloroplastic/mitochondrial-like [ Malus sylvestris (European crab apple) ]

Gene ID: 126585612, updated on 23-Nov-2023

Summary

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Gene symbol
LOC126585612
Gene description
solanesyl diphosphate synthase 3, chloroplastic/mitochondrial-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Malus sylvestris
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Malus
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Genomic context

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See LOC126585612 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
12
Annotation release Status Assembly Chr Location
100 current drMalSylv7.2 (GCF_916048215.2) 10 NC_062269.1 (36656805..36664136, complement)

Chromosome 10 - NC_062269.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC126585626 Neighboring gene uncharacterized LOC126585611 Neighboring gene transcription termination factor MTEF1, chloroplastic-like Neighboring gene uncharacterized LOC126586123

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_062269.1 Chromosome 10 Reference drMalSylv7.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables prenyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in isoprenoid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquinone biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of transferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
solanesyl diphosphate synthase 3, chloroplastic/mitochondrial-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Malus sylvestris Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference drMalSylv7.2 Primary Assembly

Genomic

  1. NC_062269.1 Reference drMalSylv7.2 Primary Assembly

    Range
    36656805..36664136 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_050250069.1 → XP_050106026.1  solanesyl diphosphate synthase 3, chloroplastic/mitochondrial-like

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases