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LOC126583550 protein farnesyltransferase subunit beta-like [ Malus sylvestris (European crab apple) ]

Gene ID: 126583550, updated on 23-Nov-2023

Summary

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Gene symbol
LOC126583550
Gene description
protein farnesyltransferase subunit beta-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Malus sylvestris
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Malus
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Genomic context

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See LOC126583550 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
15
Annotation release Status Assembly Chr Location
100 current drMalSylv7.2 (GCF_916048215.2) 9 NC_062268.1 (2053828..2057896, complement)

Chromosome 9 - NC_062268.1Genomic Context describing neighboring genes Neighboring gene 2-methylene-furan-3-one reductase Neighboring gene 2-methylene-furan-3-one reductase-like Neighboring gene CASP-like protein 4A1 Neighboring gene 2-methylene-furan-3-one reductase-like Neighboring gene formate dehydrogenase, mitochondrial Neighboring gene uncharacterized protein At4g28440-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_062268.1 Chromosome 9 Reference drMalSylv7.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein farnesyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein farnesylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of protein farnesyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein farnesyltransferase subunit beta-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Malus sylvestris Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference drMalSylv7.2 Primary Assembly

Genomic

  1. NC_062268.1 Reference drMalSylv7.2 Primary Assembly

    Range
    2053828..2057896 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_050247968.1 → XP_050103925.1  protein farnesyltransferase subunit beta-like isoform X4

  2. XM_050247969.1 → XP_050103926.1  protein farnesyltransferase subunit beta-like isoform X5

  3. XM_050247964.1 → XP_050103921.1  protein farnesyltransferase subunit beta-like isoform X1

  4. XM_050247965.1 → XP_050103922.1  protein farnesyltransferase subunit beta-like isoform X2

  5. XM_050247970.1 → XP_050103927.1  protein farnesyltransferase subunit beta-like isoform X6

  6. XM_050247966.1 → XP_050103923.1  protein farnesyltransferase subunit beta-like isoform X3

Nucleotide Protein
Heading Accession and Version

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