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CD82-AS1 CD82 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 126568847, updated on 10-Oct-2023

Summary

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Official Symbol
CD82-AS1provided by HGNC
Official Full Name
CD82 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:56287
See related
Ensembl:ENSG00000254693
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
11p11.2
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (44604508..44605337, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (44760541..44761370, complement)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105376646 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:44550187-44551103 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:44556450-44556973 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:44556974-44557496 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 3273 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr11:44561345-44561951 Neighboring gene ribosomal protein L7a pseudogene 79 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 3274 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr11:44580713-44581349 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:44583385-44583886 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:44583887-44584386 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:44587226-44587726 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4654 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4655 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4656 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4657 Neighboring gene CD82 molecule Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:44617773-44618351 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:44618352-44618931 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:44619920-44620420 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:44620421-44620921 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:44622959-44623562 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:44630450-44630950 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4659 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 3276 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 3277 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4660 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4661 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:44656670-44657458 Neighboring gene ribosomal protein L34 pseudogene 22 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:44675065-44675680 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:44676298-44676913 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr11:44685723-44686240 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr11:44692285-44693064 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr11:44693065-44693844 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr11:44693845-44694623 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr11:44710524-44711057 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:44713680-44714180 Neighboring gene long intergenic non-protein coding RNA 2704

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Long Noncoding RNA ENSG00000254693 Promotes Diabetic Kidney Disease via Interacting with HuR. Yu Q, et al. J Diabetes Res, 2022. PMID 35493610, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_182290.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC010768
    Related
    ENST00000533814.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

    Range
    44604508..44605337 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060935.1 Alternate T2T-CHM13v2.0

    Range
    44760541..44761370 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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