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Dysf dysferlin [ Alexandromys fortis (reed vole) ]

Gene ID: 126515589, updated on 18-Sep-2024

Summary

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Gene symbol
Dysf
Gene description
dysferlin
Gene type
protein coding
RefSeq status
MODEL
Organism
Alexandromys fortis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Alexandromys
Orthologs
human mouse all
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Genomic context

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See Dysf in Genome Data Viewer
Location:
chromosome: Un
Exon count:
58
Annotation release Status Assembly Chr Location
RS_2024_09 current M_Fortis_MF-2015_v1.1 (GCF_014885135.2) Unplaced Scaffold NW_026068039.1 (337536..535405, complement)

NW_026068039.1Genomic Context describing neighboring genes Neighboring gene BAG family molecular chaperone regulator 3-like Neighboring gene zinc finger protein 638 Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026068039 Unplaced Scaffold Reference M_Fortis_MF-2015_v1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in T-tubule organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in macrophage activation involved in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in monocyte activation involved in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of phagocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plasma membrane repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle fusion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in T-tubule IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasmic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dysferlin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_014885135.2-RS_2024_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_Fortis_MF-2015_v1.1

Genomic

  1. NW_026068039.1 Reference M_Fortis_MF-2015_v1.1

    Range
    337536..535405 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_050165387.1 → XP_050021344.1  dysferlin isoform X9

  2. XM_050165383.1 → XP_050021340.1  dysferlin isoform X5

  3. XM_050165380.1 → XP_050021337.1  dysferlin isoform X2

  4. XM_050165392.1 → XP_050021349.1  dysferlin isoform X13

  5. XM_050165385.1 → XP_050021342.1  dysferlin isoform X7

  6. XM_050165396.1 → XP_050021353.1  dysferlin isoform X17

  7. XM_050165394.1 → XP_050021351.1  dysferlin isoform X15

  8. XM_050165390.1 → XP_050021347.1  dysferlin isoform X11

  9. XM_050165395.1 → XP_050021352.1  dysferlin isoform X16

  10. XM_050165391.1 → XP_050021348.1  dysferlin isoform X12

  11. XM_050165393.1 → XP_050021350.1  dysferlin isoform X14

  12. XM_050165386.1 → XP_050021343.1  dysferlin isoform X8

  13. XM_050165389.1 → XP_050021346.1  dysferlin isoform X10

  14. XM_050165382.1 → XP_050021339.1  dysferlin isoform X4

  15. XM_050165381.1 → XP_050021338.1  dysferlin isoform X3

  16. XM_050165384.1 → XP_050021341.1  dysferlin isoform X6

  17. XM_050165379.1 → XP_050021336.1  dysferlin isoform X1

  18. XM_050165397.1 → XP_050021354.1  dysferlin isoform X18

Nucleotide Protein
Heading Accession and Version

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