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Tjp2 tight junction protein 2 [ Alexandromys fortis (reed vole) ]

Gene ID: 126511611, updated on 16-Sep-2024

Summary

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Gene symbol
Tjp2
Gene description
tight junction protein 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Alexandromys fortis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Alexandromys
Orthologs
human mouse all
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Genomic context

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See Tjp2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
28
Annotation release Status Assembly Chr Location
RS_2024_09 current M_Fortis_MF-2015_v1.1 (GCF_014885135.2) Unplaced Scaffold NW_026067895.1 (9029721..9147225, complement)

NW_026067895.1Genomic Context describing neighboring genes Neighboring gene amyloid beta precursor protein binding family A member 1 Neighboring gene uncharacterized LOC126512363 Neighboring gene endosomal transmembrane epsin interactor 1 Neighboring gene E3 ubiquitin-protein ligase NRDP1-like Neighboring gene phosphatidylinositol-4-phosphate 5-kinase type 1 beta Neighboring gene frataxin Neighboring gene PP2A Aalpha (PPP2R1A) and B55A (PPP2R2A) interacting phosphatase regulator 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026067895 Unplaced Scaffold Reference M_Fortis_MF-2015_v1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell junction organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in establishment of endothelial intestinal barrier IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of blood-brain barrier permeability IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in bicellular tight junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tight junction protein ZO-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_014885135.2-RS_2024_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_Fortis_MF-2015_v1.1

Genomic

  1. NW_026067895.1 Reference M_Fortis_MF-2015_v1.1

    Range
    9029721..9147225 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_050158897.1 → XP_050014854.1  tight junction protein ZO-2 isoform X3

  2. XM_050158888.1 → XP_050014845.1  tight junction protein ZO-2 isoform X3

  3. XM_050158878.1 → XP_050014835.1  tight junction protein ZO-2 isoform X3

  4. XM_050158906.1 → XP_050014863.1  tight junction protein ZO-2 isoform X3

  5. XM_050158924.1 → XP_050014881.1  tight junction protein ZO-2 isoform X5

  6. XM_050158869.1 → XP_050014826.1  tight junction protein ZO-2 isoform X2

  7. XM_050158914.1 → XP_050014871.1  tight junction protein ZO-2 isoform X4

  8. XM_050158866.1 → XP_050014823.1  tight junction protein ZO-2 isoform X1

Nucleotide Protein
Heading Accession and Version

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