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Sema6a semaphorin 6A [ Alexandromys fortis (reed vole) ]

Gene ID: 126505990, updated on 18-Sep-2024

Summary

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Gene symbol
Sema6a
Gene description
semaphorin 6A
Gene type
protein coding
RefSeq status
MODEL
Organism
Alexandromys fortis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Alexandromys
Orthologs
human mouse all
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Genomic context

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See Sema6a in Genome Data Viewer
Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
RS_2024_09 current M_Fortis_MF-2015_v1.1 (GCF_014885135.2) Unplaced Scaffold NW_026067946.1 (7687856..7811855)

NW_026067946.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L37a-like Neighboring gene uncharacterized LOC126506024 Neighboring gene uncharacterized LOC126506044 Neighboring gene COMM domain containing 10 Neighboring gene ARF like GTPase 14 effector protein like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026067946 Unplaced Scaffold Reference M_Fortis_MF-2015_v1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chemorepellent activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables semaphorin receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative chemotaxis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of axon extension involved in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neural crest cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of neuron migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in semaphorin-plexin signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
semaphorin-6A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_014885135.2-RS_2024_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_Fortis_MF-2015_v1.1

Genomic

  1. NW_026067946.1 Reference M_Fortis_MF-2015_v1.1

    Range
    7687856..7811855
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_050149239.1 → XP_050005196.1  semaphorin-6A isoform X1

  2. XM_050149241.1 → XP_050005198.1  semaphorin-6A isoform X3

  3. XM_050149243.1 → XP_050005200.1  semaphorin-6A isoform X4

  4. XM_050149240.1 → XP_050005197.1  semaphorin-6A isoform X2

Nucleotide Protein
Heading Accession and Version

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