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Sema3f semaphorin 3F [ Alexandromys fortis (reed vole) ]

Gene ID: 126499908, updated on 18-Sep-2024

Summary

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Gene symbol
Sema3f
Gene description
semaphorin 3F
Gene type
protein coding
RefSeq status
MODEL
Organism
Alexandromys fortis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Alexandromys
Orthologs
human mouse all
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Genomic context

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See Sema3f in Genome Data Viewer
Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
RS_2024_09 current M_Fortis_MF-2015_v1.1 (GCF_014885135.2) Unplaced Scaffold NW_026067915.1 (8527114..8553247, complement)

NW_026067915.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 38 member 3 Neighboring gene G protein subunit alpha transducin 1 Neighboring gene RNA binding motif protein 5 Neighboring gene RNA binding motif protein 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026067915 Unplaced Scaffold Reference M_Fortis_MF-2015_v1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chemorepellent activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables semaphorin receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative chemotaxis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of axon extension involved in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neural crest cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in semaphorin-plexin signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
semaphorin-3F

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_014885135.2-RS_2024_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_Fortis_MF-2015_v1.1

Genomic

  1. NW_026067915.1 Reference M_Fortis_MF-2015_v1.1

    Range
    8527114..8553247 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_050139400.1 → XP_049995357.1  semaphorin-3F isoform X3

  2. XM_050139396.1 → XP_049995353.1  semaphorin-3F isoform X1

  3. XM_050139398.1 → XP_049995355.1  semaphorin-3F isoform X1

  4. XM_050139399.1 → XP_049995356.1  semaphorin-3F isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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