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LOC126378047 irregular chiasm C-roughest protein-like [ Pectinophora gossypiella (pink bollworm) ]

Gene ID: 126378047, updated on 23-Nov-2023

Summary

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Gene symbol
LOC126378047
Gene description
irregular chiasm C-roughest protein-like
See related
EnsemblRapid:LOC126378047
Gene type
protein coding
RefSeq status
MODEL
Organism
Pectinophora gossypiella
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Gelechioidea; Gelechiidae; Apatetrinae; Pectinophora
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Genomic context

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See LOC126378047 in Genome Data Viewer
Location:
chromosome: 25
Exon count:
24
Annotation release Status Assembly Chr Location
100 current ilPecGoss1.1 (GCF_024362695.1) 25 NC_065428.1 (4336789..4753381)

Chromosome 25 - NC_065428.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 25-like Neighboring gene ryanodine receptor Neighboring gene golgi pH regulator Neighboring gene inner centromere protein-like Neighboring gene zinc finger matrin-type protein 5 Neighboring gene UV-resistance associated gene Neighboring gene proton-coupled amino acid transporter-like protein pathetic Neighboring gene transfer RNA valine (anticodon UAC) Neighboring gene uncharacterized LOC126377999 Neighboring gene proton-coupled amino acid transporter-like protein pathetic Neighboring gene putative uncharacterized protein DDB_G0281733 Neighboring gene uncharacterized LOC126378202 Neighboring gene uncharacterized protein K02A2.6-like Neighboring gene uncharacterized LOC126378235

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_065428.1 Chromosome 25 Reference ilPecGoss1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
irregular chiasm C-roughest protein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pectinophora gossypiella Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ilPecGoss1.1 Primary Assembly

Genomic

  1. NC_065428.1 Reference ilPecGoss1.1 Primary Assembly

    Range
    4336789..4753381
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_050026146.1 → XP_049882103.1  irregular chiasm C-roughest protein-like isoform X3

    Related
    XP_049882103.1, XM_050026146.1

  2. XM_050026143.1 → XP_049882100.1  irregular chiasm C-roughest protein-like isoform X1

    Related
    XP_049882100.1, XM_050026143.1

  3. XM_050026142.1 → XP_049882099.1  irregular chiasm C-roughest protein-like isoform X1

    Related
    XP_049882099.1, XM_050026142.1

  4. XM_050026145.1 → XP_049882102.1  irregular chiasm C-roughest protein-like isoform X2

    Related
    XP_049882102.1, XM_050026145.1
Nucleotide Protein
Heading Accession and Version

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