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SDCBP2 syndecan binding protein 2 [ Accipiter gentilis (Northern goshawk) ]

Gene ID: 126045866, updated on 3-Aug-2024

Summary

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Gene symbol
SDCBP2
Gene description
syndecan binding protein 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Accipiter gentilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Accipitrimorphae; Accipitriformes; Accipitridae; Accipitrinae; Accipiter
Orthologs
human mouse all
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Genomic context

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See SDCBP2 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_02 current bAccGen1.1 (GCF_929443795.1) 14 NC_064893.1 (32824623..32830616)

Chromosome 14 - NC_064893.1Genomic Context describing neighboring genes Neighboring gene sodium-dependent lysophosphatidylcholine symporter 1-A-like Neighboring gene FKBP prolyl isomerase 1A Neighboring gene syntaphilin Neighboring gene RAD21 cohesin complex component like 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064893.1 Chromosome 14 Reference bAccGen1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
syntenin-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_929443795.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bAccGen1.1

Genomic

  1. NC_064893.1 Reference bAccGen1.1

    Range
    32824623..32830616
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_049817475.1 → XP_049673432.1  syntenin-2

  2. XM_049817476.1 → XP_049673433.1  syntenin-2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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