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HCFC1 host cell factor C1 [ Accipiter gentilis (Northern goshawk) ]

Gene ID: 126035196, updated on 3-Aug-2024

Summary

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Gene symbol
HCFC1
Gene description
host cell factor C1
Gene type
protein coding
RefSeq status
MODEL
Organism
Accipiter gentilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Accipitrimorphae; Accipitriformes; Accipitridae; Accipitrinae; Accipiter
Orthologs
human mouse all
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Genomic context

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See HCFC1 in Genome Data Viewer
Location:
chromosome: 38
Exon count:
23
Annotation release Status Assembly Chr Location
RS_2023_02 current bAccGen1.1 (GCF_929443795.1) 38 NC_064917.1 (326076..344828, complement)

Chromosome 38 - NC_064917.1Genomic Context describing neighboring genes Neighboring gene WNK lysine deficient protein kinase 3 Neighboring gene PHD finger protein 8 Neighboring gene plasma membrane calcium-transporting ATPase 3-like Neighboring gene red-sensitive opsin

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064917.1 Chromosome 38 Reference bAccGen1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of histone methyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: host cell factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_929443795.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bAccGen1.1

Genomic

  1. NC_064917.1 Reference bAccGen1.1

    Range
    326076..344828 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_049793357.1 → XP_049649314.1  LOW QUALITY PROTEIN: host cell factor 1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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