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CHRNA1 cholinergic receptor nicotinic alpha 1 subunit [ Suncus etruscus (white-toothed pygmy shrew) ]

Gene ID: 126009095, updated on 24-Mar-2024

Summary

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Gene symbol
CHRNA1
Gene description
cholinergic receptor nicotinic alpha 1 subunit
See related
EnsemblRapid:ENSSRTG00000027212
Gene type
protein coding
RefSeq status
MODEL
Organism
Suncus etruscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Soricidae; Crocidurinae; Suncus
Orthologs
human mouse all
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Genomic context

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See CHRNA1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_02 current mSunEtr1.pri.cur (GCF_024139225.1) 5 NC_064852.1 (91824993..91844533)

Chromosome 5 - NC_064852.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene small integral membrane protein 15-like Neighboring gene U6 spliceosomal RNA Neighboring gene WAS/WASL interacting protein family member 1 Neighboring gene uncharacterized LOC126009702

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064852.1 Chromosome 5 Reference mSunEtr1.pri.cur

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylcholine-gated monoatomic cation-selective channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in monoatomic ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nervous system process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of membrane potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acetylcholine receptor subunit alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_024139225.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSunEtr1.pri.cur

Genomic

  1. NC_064852.1 Reference mSunEtr1.pri.cur

    Range
    91824993..91844533
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_049773458.1 → XP_049629415.1  acetylcholine receptor subunit alpha

    Related
    ENSSRTP00000021324.1, ENSSRTT00000034995.1
Nucleotide Protein
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