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PLEC plectin [ Suncus etruscus (white-toothed pygmy shrew) ]

Gene ID: 125997100, updated on 22-Mar-2024

Summary

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Gene symbol
PLEC
Gene description
plectin
See related
EnsemblRapid:ENSSRTG00000003417
Gene type
protein coding
RefSeq status
MODEL
Organism
Suncus etruscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Soricidae; Crocidurinae; Suncus
Orthologs
human mouse all
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Genomic context

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See PLEC in Genome Data Viewer
Location:
chromosome: 19
Exon count:
33
Annotation release Status Assembly Chr Location
RS_2023_02 current mSunEtr1.pri.cur (GCF_024139225.1) 19 NC_064866.1 (43892456..43923353, complement)

Chromosome 19 - NC_064866.1Genomic Context describing neighboring genes Neighboring gene BOLA class I histocompatibility antigen, alpha chain BL3-6-like Neighboring gene U6 spliceosomal RNA Neighboring gene poly(ADP-ribose) polymerase family member 10 Neighboring gene glutamate ionotropic receptor NMDA type subunit associated protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064866.1 Chromosome 19 Reference mSunEtr1.pri.cur

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables keratin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural molecule activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intermediate filament bundle assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in wound healing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in keratin filament IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
plectin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_024139225.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSunEtr1.pri.cur

Genomic

  1. NC_064866.1 Reference mSunEtr1.pri.cur

    Range
    43892456..43923353 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_049765551.1 → XP_049621508.1  plectin isoform X2

  2. XM_049765550.1 → XP_049621507.1  plectin isoform X1

    Related
    ENSSRTP00000002252.1, ENSSRTT00000004367.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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