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cep104 centrosomal protein 104 [ Syngnathus scovelli (Gulf pipefish) ]

Gene ID: 125988994, updated on 1-Oct-2024

Summary

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Gene symbol
cep104
Gene description
centrosomal protein 104
See related
EnsemblRapid:ENSSICG00000023335
Gene type
protein coding
RefSeq status
MODEL
Organism
Syngnathus scovelli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae; Syngnathus
Orthologs
human zebrafish all
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Genomic context

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See cep104 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
23
Annotation release Status Assembly Chr Location
RS_2024_09 current RoL_Ssco_1.2 (GCF_024217435.2) 2 NC_090848.1 (18255859..18273798, complement)
RS_2023_02 previous assembly RoL_Ssco_1.1 (GCF_024217435.1) Unplaced Scaffold NW_026061295.1 (18255859..18273798, complement)

Chromosome 2 - NC_090848.1Genomic Context describing neighboring genes Neighboring gene DNA fragmentation factor, beta polypeptide (caspase-activated DNase) Neighboring gene chromosome 2 C1orf174 homolog Neighboring gene UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7, like Neighboring gene leucine rich repeat containing 47 Neighboring gene L-rhamnose-binding lectin SML-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
centrosomal protein of 104 kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_024217435.2-RS_2024_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference RoL_Ssco_1.2

Genomic

  1. NC_090848.1 Reference RoL_Ssco_1.2

    Range
    18255859..18273798 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_049754901.1 → XP_049610858.1  centrosomal protein of 104 kDa isoform X2

  2. XM_049754898.1 → XP_049610855.1  centrosomal protein of 104 kDa isoform X1

    Related
    ENSSICP00000035420.1, ENSSICT00000043768.1

  3. XM_049754900.1 → XP_049610857.1  centrosomal protein of 104 kDa isoform X1

  4. XM_049754899.2 → XP_049610856.1  centrosomal protein of 104 kDa isoform X1

RNA

  1. XR_007488576.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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