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poglut1 protein O-glucosyltransferase 1 [ Syngnathus scovelli (Gulf pipefish) ]

Gene ID: 125988145, updated on 1-Oct-2024

Summary

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Gene symbol
poglut1
Gene description
protein O-glucosyltransferase 1
See related
EnsemblRapid:ENSSICG00000014220
Gene type
protein coding
RefSeq status
MODEL
Organism
Syngnathus scovelli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae; Syngnathus
Orthologs
human zebrafish all
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Genomic context

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See poglut1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_09 current RoL_Ssco_1.2 (GCF_024217435.2) 2 NC_090848.1 (10465133..10468690, complement)
RS_2023_02 previous assembly RoL_Ssco_1.1 (GCF_024217435.1) Unplaced Scaffold NW_026061295.1 (10465008..10468798, complement)

Chromosome 2 - NC_090848.1Genomic Context describing neighboring genes Neighboring gene ATP-binding cassette sub-family C member 4 Neighboring gene translocase of inner mitochondrial membrane domain containing 1 Neighboring gene calsequestrin-2 Neighboring gene vang-like protein 1 Neighboring gene nescient helix loop helix 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables UDP-xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-glucosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_024217435.2-RS_2024_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference RoL_Ssco_1.2

Genomic

  1. NC_090848.1 Reference RoL_Ssco_1.2

    Range
    10465133..10468690 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_049752986.2 → XP_049608943.1  protein O-glucosyltransferase 1

    Related
    ENSSICP00000020275.1, ENSSICT00000025685.1
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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