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alg9 ALG9 alpha-1,2-mannosyltransferase [ Syngnathus scovelli (Gulf pipefish) ]

Gene ID: 125982658, updated on 1-Oct-2024

Summary

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Gene symbol
alg9
Gene description
ALG9 alpha-1,2-mannosyltransferase
See related
EnsemblRapid:ENSSICG00000025451
Gene type
protein coding
RefSeq status
MODEL
Organism
Syngnathus scovelli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae; Syngnathus
Orthologs
human zebrafish all
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Genomic context

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See alg9 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2024_09 current RoL_Ssco_1.2 (GCF_024217435.2) 15 NC_090861.1 (4425202..4429706)
RS_2023_02 previous assembly RoL_Ssco_1.1 (GCF_024217435.1) Unplaced Scaffold NW_026061242.1 (4425199..4429706)

Chromosome 15 - NC_090861.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC125982709 Neighboring gene ferredoxin-fold anticodon binding domain containing 1 Neighboring gene layilin a Neighboring gene complement factor B-like Neighboring gene checkpoint kinase 1 Neighboring gene V-set and immunoglobulin domain-containing protein 10-like 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,2-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,2-mannosyltransferase ALG9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_024217435.2-RS_2024_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference RoL_Ssco_1.2

Genomic

  1. NC_090861.1 Reference RoL_Ssco_1.2

    Range
    4425202..4429706
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_049743543.2 → XP_049599500.1  alpha-1,2-mannosyltransferase ALG9 isoform X1

    Related
    ENSSICP00000037730.1, ENSSICT00000047855.1

  2. XM_049743544.2 → XP_049599501.1  alpha-1,2-mannosyltransferase ALG9 isoform X2

    Related
    ENSSICP00000037727.1, ENSSICT00000047848.1
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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