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LOC125982242 adapter molecule crk [ Syngnathus scovelli (Gulf pipefish) ]

Gene ID: 125982242, updated on 1-Oct-2024

Summary

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Gene symbol
LOC125982242
Gene description
adapter molecule crk
See related
EnsemblRapid:ENSSICG00000025050
Gene type
protein coding
RefSeq status
MODEL
Organism
Syngnathus scovelli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae; Syngnathus
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Genomic context

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See LOC125982242 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_09 current RoL_Ssco_1.2 (GCF_024217435.2) 15 NC_090861.1 (5492322..5497633, complement)
RS_2023_02 previous assembly RoL_Ssco_1.1 (GCF_024217435.1) Unplaced Scaffold NW_026061242.1 (5492322..5497631, complement)

Chromosome 15 - NC_090861.1Genomic Context describing neighboring genes Neighboring gene ELMO/CED-12 domain containing 1 Neighboring gene glutamate receptor, ionotropic, AMPA 4b Neighboring gene 14-3-3 protein epsilon Neighboring gene smoothelin-like protein 2 Neighboring gene TLC domain containing 3A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables receptor tyrosine kinase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables signaling adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
adapter molecule crk

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_024217435.2-RS_2024_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference RoL_Ssco_1.2

Genomic

  1. NC_090861.1 Reference RoL_Ssco_1.2

    Range
    5492322..5497633 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_049742612.2 → XP_049598569.1  adapter molecule crk

    Related
    ENSSICP00000037524.1, ENSSICT00000047060.1
Nucleotide Protein Strain
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