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kirrel3l kirre like nephrin family adhesion molecule 3, like [ Syngnathus scovelli (Gulf pipefish) ]

Gene ID: 125975524, updated on 1-Oct-2024

Summary

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Gene symbol
kirrel3l
Gene description
kirre like nephrin family adhesion molecule 3, like
See related
EnsemblRapid:ENSSICG00000022665
Gene type
protein coding
RefSeq status
MODEL
Organism
Syngnathus scovelli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae; Syngnathus
Orthologs
human zebrafish all
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Genomic context

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See kirrel3l in Genome Data Viewer
Location:
chromosome: 9
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2024_09 current RoL_Ssco_1.2 (GCF_024217435.2) 9 NC_090855.1 (4894211..4996503, complement)
RS_2023_02 previous assembly RoL_Ssco_1.1 (GCF_024217435.1) Unplaced Scaffold NW_026061674.1 (4894211..4996516, complement)

Chromosome 9 - NC_090855.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC125975610 Neighboring gene amyloid beta (A4) precursor-like protein 1 Neighboring gene ST14 transmembrane serine protease matriptase Neighboring gene uncharacterized si:dkey-262k9.2 Neighboring gene IgGFc-binding protein Neighboring gene FXYD domain containing ion transport regulator 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kirre like nephrin family adhesion molecule 3, like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_024217435.2-RS_2024_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference RoL_Ssco_1.2

Genomic

  1. NC_090855.1 Reference RoL_Ssco_1.2

    Range
    4894211..4996503 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_049731225.2 → XP_049587182.1  kirre like nephrin family adhesion molecule 3, like isoform X2

  2. XM_049731224.2 → XP_049587181.1  kirre like nephrin family adhesion molecule 3, like isoform X1

  3. XM_049731226.2 → XP_049587183.1  kirre like nephrin family adhesion molecule 3, like isoform X3

    Related
    ENSSICP00000034409.1, ENSSICT00000042562.1
Nucleotide Protein Strain
Heading Accession and Version

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