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C4BPB complement component 4 binding protein beta [ Orcinus orca (killer whale) ]

Gene ID: 125960240, updated on 22-Mar-2024

Summary

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Gene symbol
C4BPB
Gene description
complement component 4 binding protein beta
See related
EnsemblRapid:ENSOORG00010016349
Gene type
protein coding
RefSeq status
MODEL
Organism
Orcinus orca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Orcinus
Orthologs
human all
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Genomic context

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See C4BPB in Genome Data Viewer
Location:
chromosome: 1
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_02 current mOrcOrc1.1 (GCF_937001465.1) 1 NC_064559.1 (36825666..36835529)

Chromosome 1 - NC_064559.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117197672 Neighboring gene chromosome 1 C1orf116 homolog Neighboring gene YOD1 deubiquitinase Neighboring gene 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 Neighboring gene complement component 4 binding protein alpha Neighboring gene uncharacterized LOC125962677

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064559.1 Chromosome 1 Reference mOrcOrc1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in negative regulation of complement activation, classical pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C4b-binding protein beta chain

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_937001465.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrcOrc1.1 Primary Assembly

Genomic

  1. NC_064559.1 Reference mOrcOrc1.1 Primary Assembly

    Range
    36825666..36835529
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_049703046.1 → XP_049559003.1  C4b-binding protein beta chain isoform X2

  2. XM_004282414.3 → XP_004282462.1  C4b-binding protein beta chain isoform X1

    Related
    ENSOORP00010021386.1, ENSOORT00010024381.1
    Conserved Domains (1) summary
    cd00033
    Location:80 → 134
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system

  3. XM_049703049.1 → XP_049559006.1  C4b-binding protein beta chain isoform X3

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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