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TRMT1 tRNA methyltransferase 1 [ Panthera uncia (snow leopard) ]

Gene ID: 125929054, updated on 22-Mar-2024

Summary

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Gene symbol
TRMT1
Gene description
tRNA methyltransferase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Panthera uncia
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera
Orthologs
human mouse all
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Genomic context

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See TRMT1 in Genome Data Viewer
Location:
chromosome: A2
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2023_02 current Puncia_PCG_1.0 (GCF_023721935.1) A2 NC_064816.1 (8632926..8643423, complement)

Chromosome A2 - NC_064816.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC125929064 Neighboring gene uncharacterized LOC125929062 Neighboring gene LYL1 basic helix-loop-helix family member Neighboring gene nucleus accumbens associated 1 Neighboring gene syntaxin 10

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064816.1 Chromosome A2 Reference Puncia_PCG_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA N2-guanine methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tRNA (guanine(26)-N(2))-dimethyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023721935.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Puncia_PCG_1.0 Primary Assembly

Genomic

  1. NC_064816.1 Reference Puncia_PCG_1.0 Primary Assembly

    Range
    8632926..8643423 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_049639950.1 → XP_049495907.1  tRNA (guanine(26)-N(2))-dimethyltransferase isoform X2

  2. XM_049639951.1 → XP_049495908.1  tRNA (guanine(26)-N(2))-dimethyltransferase isoform X3

  3. XM_049639949.1 → XP_049495906.1  tRNA (guanine(26)-N(2))-dimethyltransferase isoform X1

  4. XM_049639952.1 → XP_049495909.1  tRNA (guanine(26)-N(2))-dimethyltransferase isoform X4

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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