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CHGA chromogranin A [ Panthera uncia (snow leopard) ]

Gene ID: 125909232, updated on 22-Mar-2024

Summary

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Gene symbol
CHGA
Gene description
chromogranin A
Gene type
protein coding
RefSeq status
MODEL
Organism
Panthera uncia
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera
Orthologs
human mouse all
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Genomic context

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See CHGA in Genome Data Viewer
Location:
chromosome: B3
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_02 current Puncia_PCG_1.0 (GCF_023721935.1) B3 Unlocalized Scaffold NW_026057582.1 (10960936..10973960, complement)

NW_026057582.1Genomic Context describing neighboring genes Neighboring gene modulator of apoptosis 1 Neighboring gene inositol-tetrakisphosphate 1-kinase Neighboring gene golgin A5 Neighboring gene legumain

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026057582 Chromosome B3 Unlocalized Scaffold Reference Puncia_PCG_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in adenylate cyclase-activating adrenergic receptor signaling pathway involved in cardiac muscle relaxation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in defense response to bacterium IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of catecholamine secretion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of insulin secretion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chromaffin granule IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chromogranin-A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023721935.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Puncia_PCG_1.0 Primary Assembly

Genomic

  1. NW_026057582.1 Reference Puncia_PCG_1.0 Primary Assembly

    Range
    10960936..10973960 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_049612273.1 → XP_049468230.1  chromogranin-A isoform X2

  2. XM_049612271.1 → XP_049468228.1  chromogranin-A isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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