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capn3a calpain 3a, (p94) [ Epinephelus fuscoguttatus (brown-marbled grouper) ]

Gene ID: 125901103, updated on 9-Jul-2024

Summary

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Gene symbol
capn3a
Gene description
calpain 3a, (p94)
See related
EnsemblRapid:ENSEFSG00000003657
Gene type
protein coding
RefSeq status
MODEL
Organism
Epinephelus fuscoguttatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Serranoidei; Serranidae; Epinephelinae; Epinephelini; Epinephelus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG14
Exon count:
21
Annotation release Status Assembly LG Location
100 current E.fuscoguttatus.final_Chr_v1 (GCF_011397635.1) LG14 NC_064765.1 (2843162..2860539, complement)

Linkage Group LG14 - NC_064765.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 106a Neighboring gene proton activated chloride channel 1 Neighboring gene glucosidase, alpha; neutral C Neighboring gene A kinase (PRKA) anchor protein 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064765.1 Chromosome LG14 Reference E.fuscoguttatus.final_Chr_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent cysteine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calpain-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Epinephelus fuscoguttatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference E.fuscoguttatus.final_Chr_v1 Primary Assembly

Genomic

  1. NC_064765.1 Reference E.fuscoguttatus.final_Chr_v1 Primary Assembly

    Range
    2843162..2860539 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_049596503.1 → XP_049452460.1  calpain-3

    Related
    ENSEFSP00000010369.1, ENSEFST00000010576.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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