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LOC125895823 torsin-1A-interacting protein 2-like [ Epinephelus fuscoguttatus (brown-marbled grouper) ]

Gene ID: 125895823, updated on 9-Jul-2024

Summary

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Gene symbol
LOC125895823
Gene description
torsin-1A-interacting protein 2-like
See related
EnsemblRapid:ENSEFSG00000008209
Gene type
protein coding
RefSeq status
MODEL
Organism
Epinephelus fuscoguttatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Serranoidei; Serranidae; Epinephelinae; Epinephelini; Epinephelus
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Genomic context

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See LOC125895823 in Genome Data Viewer
Location:
chromosome: LG10
Exon count:
10
Annotation release Status Assembly LG Location
100 current E.fuscoguttatus.final_Chr_v1 (GCF_011397635.1) LG10 NC_064761.1 (30061597..30068895, complement)

Linkage Group LG10 - NC_064761.1Genomic Context describing neighboring genes Neighboring gene activating transcription factor 6 Neighboring gene olfactomedin-like 2Ba Neighboring gene torsin-1A-interacting protein 2-like Neighboring gene uncharacterized LOC125896339

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064761.1 Chromosome LG10 Reference E.fuscoguttatus.final_Chr_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
torsin-1A-interacting protein 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Epinephelus fuscoguttatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference E.fuscoguttatus.final_Chr_v1 Primary Assembly

Genomic

  1. NC_064761.1 Reference E.fuscoguttatus.final_Chr_v1 Primary Assembly

    Range
    30061597..30068895 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_049587956.1 → XP_049443913.1  torsin-1A-interacting protein 2-like isoform X2

    Related
    ENSEFSP00000022961.1, ENSEFST00000023281.1

  2. XM_049587953.1 → XP_049443910.1  torsin-1A-interacting protein 2-like isoform X1

    Related
    ENSEFSP00000022960.1, ENSEFST00000023280.1

  3. XM_049587954.1 → XP_049443911.1  torsin-1A-interacting protein 2-like isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases