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tlr18 toll-like receptor 18 [ Epinephelus fuscoguttatus (brown-marbled grouper) ]

Gene ID: 125892600, updated on 9-Jul-2024

Summary

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Gene symbol
tlr18
Gene description
toll-like receptor 18
See related
EnsemblRapid:ENSEFSG00000004798
Gene type
protein coding
RefSeq status
MODEL
Organism
Epinephelus fuscoguttatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Serranoidei; Serranidae; Epinephelinae; Epinephelini; Epinephelus
Orthologs
zebrafish all
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Genomic context

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See tlr18 in Genome Data Viewer
Location:
chromosome: LG8
Exon count:
5
Annotation release Status Assembly LG Location
100 current E.fuscoguttatus.final_Chr_v1 (GCF_011397635.1) LG8 NC_064759.1 (1296325..1319059)

Linkage Group LG8 - NC_064759.1Genomic Context describing neighboring genes Neighboring gene cathepsin S-like Neighboring gene uncharacterized LOC125892603 Neighboring gene leucine rich repeat and Ig domain containing 4b Neighboring gene protein S100-A1-like Neighboring gene protein S100-A1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064759.1 Chromosome LG8 Reference E.fuscoguttatus.final_Chr_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in inflammatory response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in toll-like receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
toll-like receptor 18

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Epinephelus fuscoguttatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference E.fuscoguttatus.final_Chr_v1 Primary Assembly

Genomic

  1. NC_064759.1 Reference E.fuscoguttatus.final_Chr_v1 Primary Assembly

    Range
    1296325..1319059
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_049582621.1 → XP_049438578.1  toll-like receptor 18

  2. XM_049582622.1 → XP_049438579.1  toll-like receptor 18

    Related
    ENSEFSP00000012682.1, ENSEFST00000012913.1
Nucleotide Protein
Heading Accession and Version

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