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LOC125890941 tight junction protein ZO-2-like [ Epinephelus fuscoguttatus (brown-marbled grouper) ]

Gene ID: 125890941, updated on 9-Jul-2024

Summary

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Gene symbol
LOC125890941
Gene description
tight junction protein ZO-2-like
See related
EnsemblRapid:ENSEFSG00000019244
Gene type
protein coding
RefSeq status
MODEL
Organism
Epinephelus fuscoguttatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Serranoidei; Serranidae; Epinephelinae; Epinephelini; Epinephelus
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Genomic context

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See LOC125890941 in Genome Data Viewer
Location:
chromosome: LG6
Exon count:
24
Annotation release Status Assembly LG Location
100 current E.fuscoguttatus.final_Chr_v1 (GCF_011397635.1) LG6 NC_064757.1 (6761551..6894867, complement)

Linkage Group LG6 - NC_064757.1Genomic Context describing neighboring genes Neighboring gene protein prenyltransferase alpha subunit repeat containing 1 Neighboring gene amyloid beta (A4) precursor protein-binding, family A, member 1a Neighboring gene family with sequence similarity 189 member A2 Neighboring gene frataxin Neighboring gene 3-hydroxy-3-methylglutaryl-CoA reductase a

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064757.1 Chromosome LG6 Reference E.fuscoguttatus.final_Chr_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell junction organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in establishment of endothelial intestinal barrier IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of blood-brain barrier permeability IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in bicellular tight junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tight junction protein ZO-2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Epinephelus fuscoguttatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference E.fuscoguttatus.final_Chr_v1 Primary Assembly

Genomic

  1. NC_064757.1 Reference E.fuscoguttatus.final_Chr_v1 Primary Assembly

    Range
    6761551..6894867 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_049579869.1 → XP_049435826.1  tight junction protein ZO-2-like isoform X2

  2. XM_049579868.1 → XP_049435825.1  tight junction protein ZO-2-like isoform X1

    Related
    ENSEFSP00000056661.1, ENSEFST00000058828.1

  3. XM_049579870.1 → XP_049435827.1  tight junction protein ZO-2-like isoform X3

    Related
    ENSEFSP00000056630.1, ENSEFST00000058797.1
Nucleotide Protein
Heading Accession and Version

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