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kirrel3b kirre like nephrin family adhesion molecule 3b [ Epinephelus fuscoguttatus (brown-marbled grouper) ]

Gene ID: 125888766, updated on 9-Jul-2024

Summary

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Gene symbol
kirrel3b
Gene description
kirre like nephrin family adhesion molecule 3b
See related
EnsemblRapid:ENSEFSG00000011849
Gene type
protein coding
RefSeq status
MODEL
Organism
Epinephelus fuscoguttatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Serranoidei; Serranidae; Epinephelinae; Epinephelini; Epinephelus
Orthologs
zebrafish all
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Genomic context

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See kirrel3b in Genome Data Viewer
Location:
chromosome: LG5
Exon count:
16
Annotation release Status Assembly LG Location
100 current E.fuscoguttatus.final_Chr_v1 (GCF_011397635.1) LG5 NC_064756.1 (11692144..11880922)

Linkage Group LG5 - NC_064756.1Genomic Context describing neighboring genes Neighboring gene v-ets avian erythroblastosis virus E26 oncogene homolog 1 Neighboring gene somatolactin alpha Neighboring gene BARX homeobox 2 Neighboring gene RNA binding motif protein 7

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064756.1 Chromosome LG5 Reference E.fuscoguttatus.final_Chr_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synapse assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kin of IRRE-like protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Epinephelus fuscoguttatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference E.fuscoguttatus.final_Chr_v1 Primary Assembly

Genomic

  1. NC_064756.1 Reference E.fuscoguttatus.final_Chr_v1 Primary Assembly

    Range
    11692144..11880922
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_049576341.1 → XP_049432298.1  kin of IRRE-like protein 3 isoform X1

  2. XM_049576342.1 → XP_049432299.1  kin of IRRE-like protein 3 isoform X2

  3. XM_049576348.1 → XP_049432305.1  kin of IRRE-like protein 3 isoform X8

  4. XM_049576349.1 → XP_049432306.1  kin of IRRE-like protein 3 isoform X9

  5. XM_049576344.1 → XP_049432301.1  kin of IRRE-like protein 3 isoform X4

  6. XM_049576343.1 → XP_049432300.1  kin of IRRE-like protein 3 isoform X3

  7. XM_049576352.1 → XP_049432309.1  kin of IRRE-like protein 3 isoform X11

  8. XM_049576345.1 → XP_049432302.1  kin of IRRE-like protein 3 isoform X5

    Related
    ENSEFSP00000034667.1, ENSEFST00000035278.1

  9. XM_049576346.1 → XP_049432303.1  kin of IRRE-like protein 3 isoform X6

  10. XM_049576350.1 → XP_049432307.1  kin of IRRE-like protein 3 isoform X10

    Related
    ENSEFSP00000034665.1, ENSEFST00000035276.1

  11. XM_049576347.1 → XP_049432304.1  kin of IRRE-like protein 3 isoform X7

Nucleotide Protein
Heading Accession and Version

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