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rnlA RNA ligase and tail fiber protein attachment catalyst [ Escherichia phage T4 ]

Gene ID: 1258717, updated on 12-Jan-2023

Summary

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Gene symbol
rnlA
Gene description
RNA ligase and tail fiber protein attachment catalyst
Locus tag
T4p228
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia phage T4 (nat-host: Escherichia coli)
Lineage
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Straboviridae; Tevenvirinae; Tequatrovirus
Also known as
63
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Genomic context

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Sequence:
NC_000866.4 (136340..137464, complement)

NC_000866.4Genomic Context describing neighboring genes Neighboring gene PseT.1 conserved hypothetical protein Neighboring gene Rz-like spanin Neighboring gene Rz-like spanin Neighboring gene inhibitor of host transcription Neighboring gene endonuclease Neighboring gene ribonucleotide reductase class Ia beta subunit Neighboring gene endonuclease

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000866.4

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Direct comparison of nick-joining activity of the nucleic acid ligases from bacteriophage T4. Bullard DR, et al. Biochem J, 2006 Aug 15. PMID 16671895, Free PMC Article
  2. Bacteriophage T4 genome. Miller ES, et al. Microbiol Mol Biol Rev, 2003 Mar. PMID 12626685, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
RNA ligase and tail fiber protein attachment catalyst
NP_049839.1
  • RNA ligase 1; gp63; catalyzes the ATP-dependent covalent joining of single-stranded 5'-phosphoryl termini of DNA or RNA to single-stranded 3'-hydroxyl termini of DNA or RNA; restores cleaved tRNA Lys during T4 infection; catalyst for attaching tail fibers

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000866.4 Reference assembly

    Range
    136340..137464 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_049839.1 RNA ligase and tail fiber protein attachment catalyst [Escherichia phage T4]

    See identical proteins and their annotated locations for NP_049839.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P00971
    UniProtKB/TrEMBL
    A0A023ZX11, A0A097J7J9, A0A097J8A5, A0A7S9SW04, D9IER3
    Conserved Domains (1) summary
    PHA02589
    Location:1 → 374
    rnlA; RNA ligase A; Provisional
Nucleotide Protein
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