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PELO-AS1 PELO antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 125775243, updated on 26-Oct-2023

Summary

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Official Symbol
PELO-AS1provided by HGNC
Official Full Name
PELO antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:56263
See related
Ensembl:ENSG00000248898
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
5q11.2
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (52673427..52800813, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (53501144..53628519, complement)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105378962 Neighboring gene ReSE screen-validated silencer GRCh37_chr5:51760029-51760269 Neighboring gene major facilitator superfamily domain containing 4B pseudogene 1 Neighboring gene ReSE screen-validated silencer GRCh37_chr5:51940949-51941189 Neighboring gene NANOG hESC enhancer GRCh37_chr5:52069838-52070355 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22544 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:52095759-52096457 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:52096458-52097157 Neighboring gene integrin subunit alpha 1 Neighboring gene pelota mRNA surveillance and ribosome rescue factor Neighboring gene B3GNTL1 pseudogene 1 Neighboring gene ribosomal protein L17 pseudogene 21

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of a Novel Immune-Related lncRNA CTD-2288O8.1 Regulating Cisplatin Resistance in Ovarian Cancer Based on Integrated Analysis. Liu T, et al. Front Genet, 2022. PMID 35237300, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

General gene information

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Other Names

  • CTD-2288O8.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_186446.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC022126, AC026230
    Related
    ENST00000670789.1

  2. NR_186447.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC022126, AC026230

  3. NR_186448.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC008900, AC022126, AC026230

  4. NR_186449.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC022126, AC026230

  5. NR_186450.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC022126, AC026230

  6. NR_186451.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC022126, AC026230

  7. NR_186452.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC008900, AC022126, AC026230

  8. NR_186453.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC008900, AC022126, AC026230

  9. NR_186454.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC008900, AC026230

  10. NR_186455.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC022126, AC026230

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

    Range
    52673427..52800813 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060929.1 Alternate T2T-CHM13v2.0

    Range
    53501144..53628519 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases