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Tmtc4 Transmembrane O-mannosyltransferase targeting cadherins 4 [ Anopheles funestus (African malaria mosquito) ]

Gene ID: 125764307, updated on 16-May-2024

Summary

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Gene symbol
Tmtc4
Gene description
Transmembrane O-mannosyltransferase targeting cadherins 4
See related
VectorBase:AFUN2_009672; EnsemblRapid:AFUN2_009672
Gene type
protein coding
RefSeq status
MODEL
Organism
Anopheles funestus
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
Orthologs
fruit fly all
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Genomic context

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See Tmtc4 in Genome Data Viewer
Location:
chromosome: 2RL
Exon count:
3
Annotation release Status Assembly Chr Location
100 current idAnoFuneDA-416_04 (GCF_943734845.2) 2RL NC_064598.1 (31364138..31367090)

Chromosome 2RL - NC_064598.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC125764302 Neighboring gene uncharacterized LOC125764292 Neighboring gene zinc finger and BTB domain-containing protein 14-like Neighboring gene dual specificity mitogen-activated protein kinase kinase 4-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064598.1 Chromosome 2RL Reference idAnoFuneDA-416_04 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo transcriptome sequencing in Anopheles funestus using Illumina RNA-seq technology. Crawford JE, et al. PLoS One, 2010 Dec 2. PMID 21151993, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endoplasmic reticulum unfolded protein response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-mannosyl-transferase TMTC4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Anopheles funestus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference idAnoFuneDA-416_04 Primary Assembly

Genomic

  1. NC_064598.1 Reference idAnoFuneDA-416_04 Primary Assembly

    Range
    31364138..31367090
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_049428445.1 → XP_049284402.1  protein O-mannosyl-transferase TMTC4

    Related
    AFUN2_009672, AFUN2_009672
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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