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SDHD succinate dehydrogenase complex subunit D [ Lagopus muta (rock ptarmigan) ]

Gene ID: 125703551, updated on 26-Jun-2024

Summary

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Gene symbol
SDHD
Gene description
succinate dehydrogenase complex subunit D
Gene type
protein coding
RefSeq status
MODEL
Organism
Lagopus muta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Tetraoninae; Lagopus
Orthologs
human mouse all
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Genomic context

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See SDHD in Genome Data Viewer
Location:
chromosome: 22
Exon count:
4
Annotation release Status Assembly Chr Location
100 current bLagMut1 primary (GCF_023343835.1) 22 NC_064454.1 (6128643..6131605, complement)

Chromosome 22 - NC_064454.1Genomic Context describing neighboring genes Neighboring gene beta-carotene oxygenase 2 Neighboring gene interleukin 18 Neighboring gene testis expressed 12 Neighboring gene NKAP domain containing 1 Neighboring gene PIH1 domain containing 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064454.1 Chromosome 22 Reference bLagMut1 primary Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquinone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial electron transport, succinate to ubiquinone IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrial envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lagopus muta Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bLagMut1 primary Primary Assembly

Genomic

  1. NC_064454.1 Reference bLagMut1 primary Primary Assembly

    Range
    6128643..6131605 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048968153.1 → XP_048824110.1  succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial

Nucleotide Protein
Heading Accession and Version

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