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HS6ST1 heparan sulfate 6-O-sulfotransferase 1 [ Lagopus muta (rock ptarmigan) ]

Gene ID: 125697561, updated on 8-May-2024

Summary

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Gene symbol
HS6ST1
Gene description
heparan sulfate 6-O-sulfotransferase 1
See related
EnsemblRapid:ENSLMUG00000007695
Gene type
protein coding
RefSeq status
MODEL
Organism
Lagopus muta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Tetraoninae; Lagopus
Orthologs
human mouse all
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Genomic context

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See HS6ST1 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
2
Annotation release Status Assembly Chr Location
100 current bLagMut1 primary (GCF_023343835.1) 9 NC_064441.1 (21433409..21601971, complement)

Chromosome 9 - NC_064441.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC125697564 Neighboring gene UDP-glucose glycoprotein glucosyltransferase 1 Neighboring gene uncharacterized LOC125697563 Neighboring gene uncharacterized LOC125697321 Neighboring gene pleckstrin homology domain containing B2 Neighboring gene family with sequence similarity 168 member B

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064441.1 Chromosome 9 Reference bLagMut1 primary Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heparan sulfate 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, enzymatic modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan-sulfate 6-O-sulfotransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lagopus muta Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bLagMut1 primary Primary Assembly

Genomic

  1. NC_064441.1 Reference bLagMut1 primary Primary Assembly

    Range
    21433409..21601971 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048954894.1 → XP_048810851.1  heparan-sulfate 6-O-sulfotransferase 1

    Related
    ENSLMUP00000009966.1, ENSLMUT00000012669.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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