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PLCD1 phospholipase C delta 1 [ Lagopus muta (rock ptarmigan) ]

Gene ID: 125696260, updated on 8-May-2024

Summary

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Gene symbol
PLCD1
Gene description
phospholipase C delta 1
See related
EnsemblRapid:ENSLMUG00000012758
Gene type
protein coding
RefSeq status
MODEL
Organism
Lagopus muta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Tetraoninae; Lagopus
Orthologs
human mouse all
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Genomic context

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See PLCD1 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
17
Annotation release Status Assembly Chr Location
100 current bLagMut1 primary (GCF_023343835.1) 7 NC_064439.1 (4742714..4794369, complement)

Chromosome 7 - NC_064439.1Genomic Context describing neighboring genes Neighboring gene CTD small phosphatase like Neighboring gene villin like Neighboring gene DLEC1 cilia and flagella associated protein Neighboring gene acetyl-CoA acyltransferase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064439.1 Chromosome 7 Reference bLagMut1 primary Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol phospholipase C activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylinositol-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lagopus muta Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bLagMut1 primary Primary Assembly

Genomic

  1. NC_064439.1 Reference bLagMut1 primary Primary Assembly

    Range
    4742714..4794369 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048951712.1 → XP_048807669.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 isoform X2

    Related
    ENSLMUP00000015433.1, ENSLMUT00000021077.1

  2. XM_048951711.1 → XP_048807668.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 isoform X1

    Related
    ENSLMUP00000015429.1, ENSLMUT00000021070.1

  3. XM_048951713.1 → XP_048807670.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 isoform X3

Nucleotide Protein
Heading Accession and Version

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