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GAD2 glutamate decarboxylase 2 [ Lagopus muta (rock ptarmigan) ]

Gene ID: 125695949, updated on 18-Sep-2024

Summary

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Gene symbol
GAD2
Gene description
glutamate decarboxylase 2
See related
EnsemblRapid:ENSLMUG00000002039
Gene type
protein coding
RefSeq status
MODEL
Organism
Lagopus muta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Tetraoninae; Lagopus
Orthologs
human mouse all
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Genomic context

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See GAD2 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
19
Annotation release Status Assembly Chr Location
100 current bLagMut1 primary (GCF_023343835.1) 7 NC_064439.1 (16287152..16321499, complement)

Chromosome 7 - NC_064439.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC125696301 Neighboring gene uncharacterized LOC125696362 Neighboring gene myosin IIIA Neighboring gene G protein-coupled receptor 158

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064439.1 Chromosome 7 Reference bLagMut1 primary Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glutamate decarboxylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in gamma-aminobutyrate shunt IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glutamate decarboxylase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lagopus muta Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bLagMut1 primary Primary Assembly

Genomic

  1. NC_064439.1 Reference bLagMut1 primary Primary Assembly

    Range
    16287152..16321499 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048951005.1 → XP_048806962.1  glutamate decarboxylase 2 isoform X1

    Related
    ENSLMUP00000002648.1, ENSLMUT00000003314.1

  2. XM_048951006.1 → XP_048806963.1  glutamate decarboxylase 2 isoform X2

  3. XM_048951007.1 → XP_048806964.1  glutamate decarboxylase 2 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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