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TMEM165 transmembrane protein 165 [ Lagopus muta (rock ptarmigan) ]

Gene ID: 125691572, updated on 8-May-2024

Summary

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Gene symbol
TMEM165
Gene description
transmembrane protein 165
See related
EnsemblRapid:ENSLMUG00000015619
Gene type
protein coding
RefSeq status
MODEL
Organism
Lagopus muta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Tetraoninae; Lagopus
Orthologs
human mouse all
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Genomic context

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See TMEM165 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
7
Annotation release Status Assembly Chr Location
100 current bLagMut1 primary (GCF_023343835.1) 4 NC_064436.1 (45470235..45480999, complement)

Chromosome 4 - NC_064436.1Genomic Context describing neighboring genes Neighboring gene neuromedin U Neighboring gene phosducin like 2 Neighboring gene clock circadian regulator Neighboring gene steroid 5 alpha-reductase 3 Neighboring gene kinase insert domain receptor

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064436.1 Chromosome 4 Reference bLagMut1 primary Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables manganese ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi calcium ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in Golgi calcium ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in calcium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in manganese ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane protein 165

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lagopus muta Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bLagMut1 primary Primary Assembly

Genomic

  1. NC_064436.1 Reference bLagMut1 primary Primary Assembly

    Range
    45470235..45480999 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048941037.1 → XP_048796994.1  transmembrane protein 165 isoform X2

  2. XM_048941035.1 → XP_048796992.1  transmembrane protein 165 isoform X1

    Related
    ENSLMUP00000019094.1, ENSLMUT00000025753.1

  3. XM_048941038.1 → XP_048796995.1  transmembrane protein 165 isoform X3

Nucleotide Protein
Heading Accession and Version

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