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DERA deoxyribose-phosphate aldolase [ Lagopus muta (rock ptarmigan) ]

Gene ID: 125688236, updated on 8-May-2024

Summary

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Gene symbol
DERA
Gene description
deoxyribose-phosphate aldolase
See related
EnsemblRapid:ENSLMUG00000005228
Gene type
protein coding
RefSeq status
MODEL
Organism
Lagopus muta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Tetraoninae; Lagopus
Orthologs
human mouse all
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Genomic context

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See DERA in Genome Data Viewer
Location:
chromosome: 1
Exon count:
9
Annotation release Status Assembly Chr Location
100 current bLagMut1 primary (GCF_023343835.1) 1 NC_064433.1 (62309682..62373927)

Chromosome 1 - NC_064433.1Genomic Context describing neighboring genes Neighboring gene EGFR pathway substrate 8, signaling adaptor Neighboring gene serine/threonine kinase receptor associated protein Neighboring gene solute carrier family 15 member 5 Neighboring gene microsomal glutathione S-transferase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064433.1 Chromosome 1 Reference bLagMut1 primary Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables deoxyribose-phosphate aldolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in deoxyribonucleotide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
deoxyribose-phosphate aldolase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lagopus muta Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bLagMut1 primary Primary Assembly

Genomic

  1. NC_064433.1 Reference bLagMut1 primary Primary Assembly

    Range
    62309682..62373927
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048934002.1 → XP_048789959.1  deoxyribose-phosphate aldolase isoform X2

  2. XM_048934001.1 → XP_048789958.1  deoxyribose-phosphate aldolase isoform X1

    Related
    ENSLMUP00000006914.1, ENSLMUT00000008546.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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