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CHSY3 chondroitin sulfate synthase 3 [ Lagopus muta (rock ptarmigan) ]

Gene ID: 125686809, updated on 8-May-2024

Summary

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Gene symbol
CHSY3
Gene description
chondroitin sulfate synthase 3
See related
EnsemblRapid:ENSLMUG00000011590
Gene type
protein coding
RefSeq status
MODEL
Organism
Lagopus muta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Tetraoninae; Lagopus
Orthologs
human mouse all
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Genomic context

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See CHSY3 in Genome Data Viewer
Location:
chromosome: Z
Exon count:
3
Annotation release Status Assembly Chr Location
100 current bLagMut1 primary (GCF_023343835.1) Z NC_064472.1 (51102923..51254977)

Chromosome Z - NC_064472.1Genomic Context describing neighboring genes Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 19 Neighboring gene membrane integral NOTCH2 associated receptor 2 Neighboring gene histidine triad nucleotide binding protein 1 Neighboring gene LYR motif containing 7

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064472.1 Chromosome Z Reference bLagMut1 primary Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi cisterna membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chondroitin sulfate synthase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lagopus muta Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bLagMut1 primary Primary Assembly

Genomic

  1. NC_064472.1 Reference bLagMut1 primary Primary Assembly

    Range
    51102923..51254977
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048931256.1 → XP_048787213.1  chondroitin sulfate synthase 3

    Related
    ENSLMUP00000014085.1, ENSLMUT00000019123.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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