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LOC125679490 putative polypeptide N-acetylgalactosaminyltransferase 10 [ Ostrea edulis ]

Gene ID: 125679490, updated on 16-Nov-2023

Summary

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Gene symbol
LOC125679490
Gene description
putative polypeptide N-acetylgalactosaminyltransferase 10
Gene type
protein coding
RefSeq status
MODEL
Organism
Ostrea edulis
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Pteriomorphia; Ostreida; Ostreoidea; Ostreidae; Ostrea
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Genomic context

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See LOC125679490 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
20
Annotation release Status Assembly Chr Location
RS_2023_05 current xbOstEdul1.1 (GCF_947568905.1) 2 NC_079165.1 (49808763..50022460)
100 previous assembly OEROSLIN_1.1 (GCF_023158985.2) Unplaced Scaffold NW_026039335.1 (44659183..44751037)

Chromosome 2 - NC_079165.1Genomic Context describing neighboring genes Neighboring gene DNA-directed RNA polymerase I subunit RPA49-like Neighboring gene uncharacterized LOC125679498 Neighboring gene uncharacterized LOC130051772 Neighboring gene uncharacterized LOC130051778 Neighboring gene uncharacterized LOC130051779 Neighboring gene uncharacterized LOC130051776 Neighboring gene uncharacterized LOC130051782 Neighboring gene uncharacterized LOC130051777 Neighboring gene uncharacterized LOC130051774 Neighboring gene uncharacterized LOC130051781 Neighboring gene uncharacterized LOC130051455 Neighboring gene homeobox protein Mohawk-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative polypeptide N-acetylgalactosaminyltransferase 10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_947568905.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference xbOstEdul1.1

Genomic

  1. NC_079165.1 Reference xbOstEdul1.1

    Range
    49808763..50022460
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_056154407.1 → XP_056010382.1  putative polypeptide N-acetylgalactosaminyltransferase 10 isoform X2

  2. XM_056154406.1 → XP_056010381.1  putative polypeptide N-acetylgalactosaminyltransferase 10 isoform X2

  3. XM_056154404.1 → XP_056010379.1  putative polypeptide N-acetylgalactosaminyltransferase 10 isoform X1

  4. XM_056154408.1 → XP_056010383.1  putative polypeptide N-acetylgalactosaminyltransferase 10 isoform X3

  5. XM_056154410.1 → XP_056010385.1  putative polypeptide N-acetylgalactosaminyltransferase 10 isoform X5

  6. XM_056154409.1 → XP_056010384.1  putative polypeptide N-acetylgalactosaminyltransferase 10 isoform X4

  7. XM_056154405.1 → XP_056010380.1  putative polypeptide N-acetylgalactosaminyltransferase 10 isoform X1

Nucleotide Protein
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