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LOC125679023 chitin synthase chs-2-like [ Ostrea edulis ]

Gene ID: 125679023, updated on 26-Jun-2024

Summary

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Gene symbol
LOC125679023
Gene description
chitin synthase chs-2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Ostrea edulis
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Pteriomorphia; Ostreida; Ostreoidea; Ostreidae; Ostrea
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Genomic context

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See LOC125679023 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2023_05 current xbOstEdul1.1 (GCF_947568905.1) 2 NC_079165.1 (99786011..99804235)
100 previous assembly OEROSLIN_1.1 (GCF_023158985.2) Unplaced Scaffold NW_026039335.1 (90502416..90520321, complement)

Chromosome 2 - NC_079165.1Genomic Context describing neighboring genes Neighboring gene craniofacial development protein 2-like Neighboring gene uncharacterized LOC130052017 Neighboring gene chitin synthase chs-1-like Neighboring gene dnaJ homolog subfamily C member 10-like Neighboring gene uncharacterized LOC130052018

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chitin synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell periphery IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell septum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chitin synthase chs-2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_947568905.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference xbOstEdul1.1

Genomic

  1. NC_079165.1 Reference xbOstEdul1.1

    Range
    99786011..99804235
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048917906.2 → XP_048773863.2  chitin synthase chs-2-like isoform X1

  2. XM_056155730.1 → XP_056011705.1  chitin synthase chs-2-like isoform X2

  3. XM_048917907.2 → XP_048773864.2  chitin synthase chs-2-like isoform X2

Nucleotide Protein
Heading Accession and Version

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