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LOC125675745 beta-1,4-N-acetylgalactosaminyltransferase bre-4-like [ Ostrea edulis ]

Gene ID: 125675745, updated on 16-Nov-2023

Summary

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Gene symbol
LOC125675745
Gene description
beta-1,4-N-acetylgalactosaminyltransferase bre-4-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Ostrea edulis
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Pteriomorphia; Ostreida; Ostreoidea; Ostreidae; Ostrea
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Genomic context

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See LOC125675745 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_05 current xbOstEdul1.1 (GCF_947568905.1) 3 NC_079166.1 (88147486..88160159)
100 previous assembly OEROSLIN_1.1 (GCF_023158985.2) Unplaced Scaffold NW_026039224.1 (10703264..10715047, complement)

Chromosome 3 - NC_079166.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC125674516 Neighboring gene uncharacterized LOC125672965 Neighboring gene uncharacterized LOC130052974 Neighboring gene uncharacterized LOC125677362

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetyl-beta-glucosaminyl-glycoprotein 4-beta-N-acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables beta-1,4-N-acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycosphingolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-N-acetylgalactosaminyltransferase bre-4-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_947568905.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference xbOstEdul1.1

Genomic

  1. NC_079166.1 Reference xbOstEdul1.1

    Range
    88147486..88160159
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048913535.2 → XP_048769492.1  beta-1,4-N-acetylgalactosaminyltransferase bre-4-like

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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