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LOC125671361 carbohydrate sulfotransferase 15-like [ Ostrea edulis ]

Gene ID: 125671361, updated on 16-Nov-2023

Summary

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Gene symbol
LOC125671361
Gene description
carbohydrate sulfotransferase 15-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Ostrea edulis
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Pteriomorphia; Ostreida; Ostreoidea; Ostreidae; Ostrea
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Genomic context

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See LOC125671361 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_05 current xbOstEdul1.1 (GCF_947568905.1) 4 NC_079167.1 (65394276..65422339, complement)
100 previous assembly OEROSLIN_1.1 (GCF_023158985.2) Unplaced Scaffold NW_026039113.1 (74167013..74193783, complement)

Chromosome 4 - NC_079167.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC125671387 Neighboring gene protein FAM135A-like Neighboring gene uncharacterized LOC130054269 Neighboring gene uncharacterized LOC125668276 Neighboring gene caspase activity and apoptosis inhibitor 1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in hexose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 15-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_947568905.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference xbOstEdul1.1

Genomic

  1. NC_079167.1 Reference xbOstEdul1.1

    Range
    65394276..65422339 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048907006.2 → XP_048762963.2  carbohydrate sulfotransferase 15-like isoform X2

  2. XM_048907004.2 → XP_048762961.2  carbohydrate sulfotransferase 15-like isoform X2

  3. XM_056163468.1 → XP_056019443.1  carbohydrate sulfotransferase 15-like isoform X1

Nucleotide Protein
Heading Accession and Version

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