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LOC125668734 heparan sulfate glucosamine 3-O-sulfotransferase 5-like [ Ostrea edulis ]

Gene ID: 125668734, updated on 16-Nov-2023

Summary

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Gene symbol
LOC125668734
Gene description
heparan sulfate glucosamine 3-O-sulfotransferase 5-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Ostrea edulis
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Pteriomorphia; Ostreida; Ostreoidea; Ostreidae; Ostrea
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Genomic context

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See LOC125668734 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2023_05 current xbOstEdul1.1 (GCF_947568905.1) 4 NC_079167.1 (16328651..16383739, complement)
100 previous assembly OEROSLIN_1.1 (GCF_023158985.2) Unplaced Scaffold NW_026039113.1 (22957991..22975631)

Chromosome 4 - NC_079167.1Genomic Context describing neighboring genes Neighboring gene intraflagellar transport protein 172 homolog Neighboring gene uridine-cytidine kinase-like 1 Neighboring gene UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter-like Neighboring gene 40S ribosomal protein S12-like Neighboring gene uncharacterized LOC130054014

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate glucosamine 3-O-sulfotransferase 1-like; heparan sulfate glucosamine 3-O-sulfotransferase 5-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_947568905.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference xbOstEdul1.1

Genomic

  1. NC_079167.1 Reference xbOstEdul1.1

    Range
    16328651..16383739 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048903110.2 → XP_048759067.1  heparan sulfate glucosamine 3-O-sulfotransferase 1-like isoform X1

  2. XM_048903108.2 → XP_048759065.1  heparan sulfate glucosamine 3-O-sulfotransferase 1-like isoform X1

  3. XM_048903109.2 → XP_048759066.1  heparan sulfate glucosamine 3-O-sulfotransferase 1-like isoform X1

  4. XM_056162081.1 → XP_056018056.1  heparan sulfate glucosamine 3-O-sulfotransferase 5-like isoform X2

  5. XM_056162080.1 → XP_056018055.1  heparan sulfate glucosamine 3-O-sulfotransferase 5-like isoform X2

  6. XM_048903113.2 → XP_048759070.1  heparan sulfate glucosamine 3-O-sulfotransferase 5-like isoform X2

  7. XM_048903116.2 → XP_048759073.1  heparan sulfate glucosamine 3-O-sulfotransferase 5-like isoform X2

  8. XM_048903118.2 → XP_048759075.1  heparan sulfate glucosamine 3-O-sulfotransferase 5-like isoform X2

  9. XM_048903114.2 → XP_048759071.1  heparan sulfate glucosamine 3-O-sulfotransferase 5-like isoform X2

  10. XM_048903121.2 → XP_048759078.1  heparan sulfate glucosamine 3-O-sulfotransferase 5-like isoform X2

  11. XM_048903112.2 → XP_048759069.1  heparan sulfate glucosamine 3-O-sulfotransferase 5-like isoform X2

  12. XM_048903115.2 → XP_048759072.1  heparan sulfate glucosamine 3-O-sulfotransferase 5-like isoform X2

  13. XM_048903117.2 → XP_048759074.1  heparan sulfate glucosamine 3-O-sulfotransferase 5-like isoform X2

  14. XM_048903120.2 → XP_048759077.1  heparan sulfate glucosamine 3-O-sulfotransferase 5-like isoform X2

Nucleotide Protein
Heading Accession and Version

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