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LOC125667890 alpha-1,3/1,6-mannosyltransferase ALG2-like [ Ostrea edulis ]

Gene ID: 125667890, updated on 18-Sep-2024

Summary

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Gene symbol
LOC125667890
Gene description
alpha-1,3/1,6-mannosyltransferase ALG2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Ostrea edulis
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Pteriomorphia; Ostreida; Ostreoidea; Ostreidae; Ostrea
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Genomic context

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See LOC125667890 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_05 current xbOstEdul1.1 (GCF_947568905.1) 4 NC_079167.1 (6116995..6125663)
100 previous assembly OEROSLIN_1.1 (GCF_023158985.2) Unplaced Scaffold NW_026039113.1 (20867523..20876358)

Chromosome 4 - NC_079167.1Genomic Context describing neighboring genes Neighboring gene cAMP-dependent protein kinase catalytic subunit 1 Neighboring gene homeobox-like protein HDP1 Neighboring gene putative uncharacterized protein DDB_G0286901 Neighboring gene WD repeat-containing protein 70-like Neighboring gene T-cell acute lymphocytic leukemia protein 1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GDP-Man:Man1GlcNAc2-PP-Dol alpha-1,3-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables alpha-1,3-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,3/1,6-mannosyltransferase ALG2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_947568905.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference xbOstEdul1.1

Genomic

  1. NC_079167.1 Reference xbOstEdul1.1

    Range
    6116995..6125663
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048901551.2 → XP_048757508.2  alpha-1,3/1,6-mannosyltransferase ALG2-like isoform X1

  2. XM_048901556.2 → XP_048757513.1  alpha-1,3/1,6-mannosyltransferase ALG2-like isoform X2

  3. XM_048901554.2 → XP_048757511.1  alpha-1,3/1,6-mannosyltransferase ALG2-like isoform X2

  4. XM_048901555.2 → XP_048757512.1  alpha-1,3/1,6-mannosyltransferase ALG2-like isoform X2

Nucleotide Protein
Heading Accession and Version

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