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LOC125666501 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C-like [ Ostrea edulis ]

Gene ID: 125666501, updated on 16-Nov-2023

Summary

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Gene symbol
LOC125666501
Gene description
alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Ostrea edulis
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Pteriomorphia; Ostreida; Ostreoidea; Ostreidae; Ostrea
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Genomic context

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See LOC125666501 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_05 current xbOstEdul1.1 (GCF_947568905.1) 10 NC_079173.1 (392170..427409)
100 previous assembly OEROSLIN_1.1 (GCF_023158985.2) Unplaced Scaffold NW_026038639.1 (450510..482045, complement)

Chromosome 10 - NC_079173.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC125682408 Neighboring gene uncharacterized LOC125652359 Neighboring gene uncharacterized LOC130050843 Neighboring gene uncharacterized LOC130050853 Neighboring gene uncharacterized LOC125666525 Neighboring gene transfer RNA serine (anticodon AGA) Neighboring gene uncharacterized LOC130050856

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_947568905.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference xbOstEdul1.1

Genomic

  1. NC_079173.1 Reference xbOstEdul1.1

    Range
    392170..427409
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_056151620.1 → XP_056007595.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C-like

RNA

  1. XR_008799106.1 RNA Sequence

  2. XR_008799104.1 RNA Sequence

  3. XR_008799105.1 RNA Sequence

  4. XR_008799107.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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